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Cave Geomicrobiology and Biogeochemistry Research
Louisiana State University, Geomicrobiology & Environmental Microbiology Studies Group

Louisiana State University
Dr. Annette Summers Engel

Department of Geology and Geophysics
E235 Howe-Russell Geoscience Complex
Louisiana State University
Baton Rouge, LA 70803
office:  225-578-2469  fax:  225-578-2302

Once considered a matter of fiction, scientists are now confident that microbial life inhabits nearly every environment on Earth, with millions of estimated microbial species occurring worldwide. The subsurface is one of the Earth's major habitats, defined by some researchers as being greater than 8 meters depth for terrestrial settings and more than 10 cm depth for marine settings. Surface habitats coupled relatively constant temperatures and protection from potentially harsh surface conditions (e.g., UV radiation) with an abundance of inorganic solutes and mineral surfaces that can serve as energy and nutrient sources for microbes.

Despite recent scientific advances to identify microbes from surface habitats and to reconstruct phylogenetic relationships, the diversity and types of microbes, as well as the metabolic capabilities of microbes, are still poorly understood. One reason for this is that the surface is difficult to access. Caves, however, are windows into the subsurface which can allow scientists to access the subsurface. Cave exploration does not usually require expensive equipment, and microbial communities living in the caves can be directly examined, sampled, and manipulated. Microbiological and geological investigations in cave and karst systems have successfully been conducted for >50 years, and recently sampling strategies to lessen human impact.


Microbial diversity of subterranean ecosystems

Lower Kane Cave, Wyoming

Related research in sulfidic cave systems, including the Lower Kane Cave
project with collaborators from the University of Texas- Austin and the University of Illinois, as well as from the Technische Universitat -Munich, Germany.

Pictures and movie clip from Field Work in Lower Kane Cave, Wyoming and Research Results

The Kane Caves Project: website maintained at the University of Texas- Austin


Researchers sampling geochemical parameters in the
sulfidic stream water in the Pozzo di Cristali,
Frasassi Caves, Italy. Photo by A.S. Engel.



This research has been partially supported by the:


 

Inquire with Dr. Engel if you are interested in the work.


The Frasassi Caves, Italy

The Frasassi Cave system near Gubbio, Italy, provides an excellent molecular and ecophysiological comparison to Lower Kane Cave in the USA. We have been studying the microbial diversity of the Frasassi caves since 1997. Microbial mats in the Frasassi caves are distributed throughout the aphotic habitat, as well as in the emergent surface spring (photic habitat), along nearly a kilometer-long flow path. Our work has revealed that the microbial communities in Frasassi system , dominated by Epsilonproteobacteria are closely-related to microbes in Lower Kane Cave, half a world away!

The Frasassi Caves: website designed and managed for tourists interested in the caves

Pictures from 2005 Field Work and Research Results

Other Sulfidic Caves
Our interests in the diversity and biogeography of Epsilonproteobacteria in terrestrial habitats has taken us to many different sulfidic caves around the world.

Epsilonproteobacteria Research at LSU


Microbially-enhanced secondary porosity in karst

Karst is important globally for groundwater and petroleum reservoirs, and appreciating how karst terrains evolve through time will aid in understanding of where new resources may exist. Some of the world’s most productive oil reserves are found in carbonate rocks having significant secondary porosity, perhaps generated by sulfuric acid.

Based on research from Lower Kane Cave, Wyoming, significant dissolution of carbonate occurs in the presence of active sulfur-oxidizing bacteria that colonize subaqueous carbonate surfaces. The sulfur-oxidizers survive at extremely low PO2, suggesting that karstification may occur at much greater aquifer depths in the absence of oxygen. We are testing the hypothesis that sulfur-oxidizers are modifying karst porosity in the Edwards and Trinity Aquifers of Central Texas.

The Edwards Aquifer: website describing details from this huge karst groundwater system in Central Texas, full of caves and unique critters! 

Edwards Aquifer Research at LSU

Edwards Aquifer Research Photos (link to Kelli Willson thesis research)


Photo by A.S.Engel.


DAPI-stained microbes from the Edwards
Aquifer, Central Texas. Photo by A.S. Engel.


SEM images of calcite surface from reacted microcosm from a
bad-water well in the Edwards Aquifer, Central Texas.
Photo by K.W.Randall.



This research is being supported by the  

and has been partially supported by the Council on Research, Faculty Research Grant, LSU.

Inquire with Dr. Engel if you are interested in the work.


Cave and Karst Organizations and Links

 

Iron-rich microbial mats in Lower Kane Cave.
Photo by A.S. Engel.

Links to Other Cave Geomicrobiology Research Programs in the USA

  • University of New Mexico (Northup) and New Mexico Tech (Boston)- Geomicrobiology of Lechuguilla Cave, NM, and Cueva de Villa Luz, Mexico
     
  • Penn State University (Macalady) - Geomicrobiology of Frasassi Caves and Grotta Nuova di Rio Garrafo, Italy.
     
  • Northern Kentucky University (Barton) - Cave microbiology research, specifically of Mammoth Cave and surrounding caves in Kentucky
     
  • University of Texas at Austin (Bennett) - Lower Kane Cave research
     
  • Western Illinois University (Melim) - Studies of pool fingers from Hidden Cave, New Mexico

 


Please contact Dr. Annette Engel for more information regarding the research or photographs. Call (225) 578-2469 or email.
Address: Department of Geology and Geophysics, Louisiana State University, Baton Rouge, LA 70803.   
©AS Engel2007